Package: lfc 0.2.3

Florian Erhard

lfc: Log Fold Change Distribution Tools for Working with Ratios of Counts

Ratios of count data such as obtained from RNA-seq are modelled using Bayesian statistics to derive posteriors for effects sizes. This approach is described in Erhard & Zimmer (2015) <doi:10.1093/nar/gkv696> and Erhard (2018) <doi:10.1093/bioinformatics/bty471>.

Authors:Florian Erhard

lfc_0.2.3.tar.gz
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lfc_0.2.3.tgz(r-4.4-any)lfc_0.2.3.tgz(r-4.3-any)
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lfc.pdf |lfc.html✨
lfc/json (API)

# Install 'lfc' in R:
install.packages('lfc', repos = c('https://erhard-lab.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/erhard-lab/lfc/issues

On CRAN:

bayesiantranscriptomicsdifferentialexpression

12 exports 7 stars 1.47 score 0 dependencies 1 dependents 4 scripts 249 downloads

Last updated 1 years agofrom:5842560004. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 12 2024
R-4.5-winOKSep 12 2024
R-4.5-linuxOKSep 12 2024
R-4.4-winOKSep 12 2024
R-4.4-macOKSep 12 2024
R-4.3-winOKSep 12 2024
R-4.3-macOKSep 12 2024

Exports:CenterMediandlfcEmpiricalBayesPriorltopNormLFCplfcPsiLFCPsiLFC.septolqlfcresultsrlfc

Dependencies:

Using LFC

Florian Erhard

Rendered fromlfc_vignette.Rmdusingknitr::rmarkdownon Sep 12 2024.

Last update: 2023-04-19
Started: 2017-11-03